Genomes and Genes
Gene Symbol: RNF135
Description: ring finger protein 135
Alias: L13, MMFD, REUL, Riplet, E3 ubiquitin-protein ligase RNF135, RIG-I E3 ubiquitin ligase, RING-type E3 ubiquitin transferase RNF135
Publications128 found, 100 shown here
- TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-I-mediated antiviral activityMichaela U Gack
Department of Microbiology and Molecular Genetics and Tumor Virology Division, New England Primate Research Center, Harvard Medical School, 1 Pine Hill Drive, Southborough, Massachusetts 01772, USA
Nature 446:916-920. 2007..Thus, we demonstrate that TRIM25 E3 ubiquitin ligase induces the Lys 63-linked ubiquitination of RIG-I, which is crucial for the cytosolic RIG-I signalling pathway to elicit host antiviral innate immunity...
- Mutations in RNF135, a gene within the NF1 microdeletion region, cause phenotypic abnormalities including overgrowthJenny Douglas
Section of Cancer Genetics, Institute of Cancer Research, Sutton, Surrey SM2 5NG, UK
Nat Genet 39:963-5. 2007..We identified mutations in RNF135, which is within the NF1 microdeletion region, in six families characterized by overgrowth, learning disability, ..
- Riplet/RNF135, a RING finger protein, ubiquitinates RIG-I to promote interferon-beta induction during the early phase of viral infectionHiroyuki Oshiumi
Department of Microbiology and Immunology, Hokkaido University Graduate School of Medicine, Sapporo, Japan
J Biol Chem 284:807-17. 2009..Here we identify an alternative factor, Riplet/RNF135, that promotes RIG-I activation independent of TRIM25...
- REUL is a novel E3 ubiquitin ligase and stimulator of retinoic-acid-inducible gene-IDong Gao
Key Laboratory of Cell Proliferation and Differentiation Ministry of Education, College of Life Sciences, Peking University, Beijing, China
PLoS ONE 4:e5760. 2009..In this study, we identified REUL, a RING-finger protein, as a specific RIG-I-interacting protein...
- Molecular characterization and gene content of breakpoint boundaries in patients with neurofibromatosis type 1 with 17q11.2 microdeletionsD E Jenne
Max Planck Institute of Neurobiology, Department of Neuroimmunology, Martinsried, Germany
Am J Hum Genet 69:516-27. 2001....
- Complete physical map and gene content of the human NF1 tumor suppressor region in human and mouseDieter E Jenne
Department of Neuroimmunology, Max Planck Institute of Neurobiology, Martinsried, Germany
Genes Chromosomes Cancer 37:111-20. 2003....
- 'Candidatus Odyssella thessalonicensis' gen. nov., sp. nov., an obligate intracellular parasite of Acanthamoeba speciesR J Birtles
Unite des Rickettsies, CNRS UPRESA 6020, Faculte de Medecine, Marseille, France
Int J Syst Evol Microbiol 50:63-72. 2000An intracellular bacterium, strain L13, was observed infecting an environmental isolate of an Acanthamoeba species...
- Mitochondrial RNA and DNA alterations in HIV lipoatrophy are linked to antiretroviral therapy and not to HIV infectionGrace A McComsey
Case Western Reserve University, Cleveland, OH, USA
Antivir Ther 13:715-22. 2008..The aim of this study was to assess the effect of antiretroviral therapy (ART) versus HIV on mitochondria in fat...
- The role of disordered ribosomal protein extensions in the early steps of eubacterial 50 S ribosomal subunit assemblyYouri Timsit
Institut de Biologie Physico Chimique CNRS, Paris, France
Int J Mol Sci 10:817-34. 2009..In this paper, the structures of the proteins L3, L4, L13, L20, L22 and L24 that have been experimentally found to be essential for the first steps of ribosome assembly have ..
- RNA binding proteins of the large subunit of bovine mitochondrial ribosomesM A Piatyszek
Department of Biochemistry and Molecular Biology, University of Florida, Gainesville 32610
Nucleic Acids Res 16:2565-83. 1988..Results from these four approaches allowed us to identify a set of six proteins (L7, L13, L14, L21, L26, and L44) which appear to be strong RNA binding proteins...
- Disruption of the MRP-L23 gene encoding the mitochondrial ribosomal protein L23 is lethal for Kluyveromyces lactis but not for Saccharomyces cerevisiaeG L Murray
Molecular and Cellular Genetics Group, Research School of Biological Sciences, Australian National University, Australia
Curr Genet 37:87-93. 2000..encodes a polypeptide of 155 amino acids that shares 70% and 43% identity to the ribosomal proteins L23 and L13 of Saccharomyces cerevisiae and Escherichia coli...
- Characterization and analysis of posttranslational modifications of the human large cytoplasmic ribosomal subunit proteins by mass spectrometry and Edman sequencingTatyana I Odintsova
Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russian Federation
J Protein Chem 22:249-58. 2003..found, 22 of which showed masses in accordance with the SwissProt database (June 2002) masses (proteins L6, L7, L9, L13, L15, L17, L18, L21, L22, L24, L26, L27, L30, L32, L34, L35, L36, L37, L37A, L38, L39, L41)...
- Genetic characterization of the Korean LATC06 rinderpest vaccine strainJung Yong Yeh
Division of Veterinary Biotechnology, National Veterinary Research and Quarantine Service, Kyunggi Do, Anyang, Korea
Virus Genes 42:71-5. 2011..for generating F1/F2 proteins were identified in the same amino acid position (aa 108) as F proteins in LATC06, L13, RBT1, Kabete O, and RBOK strains...
- The expression of CD11/CD18 molecules on rabbit leucocytes: identification of monoclonal antibodies to CD18 and their effect on cellular adhesion processesJ Galea Lauri
Department of Biochemistry and Cell Biology, Hunterian Institute, Royal College of Surgeons, London
Mol Immunol 30:529-37. 1993The monoclonal antibodies, L13/64 and RCN1/21, raised against rabbit leucocytes, have been shown, by sequential immunoprecipitation and immunoblotting, to react with the rabbit CD18 molecule...
- Visualization of protein-nucleic acid interactions involved in the in vitro assembly of the Escherichia coli 50 S ribosomal subunitS J Tumminia
Roche Institute of Molecular Biology, Roche Research Center, Nutley, NJ 07110
J Mol Biol 235:1239-50. 1994..and enhanced in 23 S rRNA after its association with the rest of the early assembly proteins, namely L3, L20, L13, L4 and L22...
- Biocatalytical production of (5S)-hydroxy-2-hexanoneMichael Katzberg
Institute of Biochemistry, Dresden University of Technology, Dresden, D 01062, Dresden, Germany
Org Biomol Chem 7:304-14. 2009..Among the tested biocatalysts the whole-cell system S. cerevisiae L13 surpasses the bacterial dehydrogenase ADH-T in terms of chemoselectivity. The use of whole-cells of S...
- A simple cell line based in vitro test system for N-methyl-D-aspartate (NMDA) receptor ligandsRalf D Steinmetz
Institute for Pharmaceutical Chemistry, Johann Wolfgang Goethe University Frankfurt, Marie Curie Strasse 9, D 60439 Frankfurt Main, Germany
J Neurosci Methods 113:99-110. 2002..7 microM for L12-G10 (NR1-1a/NR2A) and 2.8 microM for L13-E6 (NR1-1a/NR2B), respectively...
- Temperature sensitivity caused by mutant release factor 1 is suppressed by mutations that affect 16S rRNA maturationMagdalena Kaczanowska
Department of Genetics, Microbiology and Toxicology, University of Stockholm, S 106 91 Stockholm, Sweden
J Bacteriol 186:3046-55. 2004..a base pair in the transcription terminator stem for the rplM-rpsI operon, which encodes ribosomal proteins L13 and S9...
- Effects of the U1C L13 mutation and temperature regulation of yeast commitment complex formationHansen Du
Howard Hughes Medical Institute, Department of Biology, Brandeis University, MS008, 415 South Street, Waltham, MA 02454, USA
Proc Natl Acad Sci U S A 101:14841-6. 2004..Mutations of amino acid L13 within this domain rescue the essential function of the helicase protein Prp28p...
- Characterization of an upstream regulatory element of adenovirus L1 poly (A) siteLi Liu
Department of Microbiology and Etiology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing
Virology 337:124-35. 2005..transfection of a plasmid expressing Chloramphenicol Acetyl Transferase with a tandem poly (A) minigene system (L13) (DeZazzo, J.D., Falck-Pedersen, E., Imperiale, M.J., 1991...
- Activation of the ribosomal protein L13 gene in human gastrointestinal cancerToshihisa Kobayashi
First Department of Internal Medicine, Cancer Research Institute, Sapporo Medical University School of Medicine, Sapporo 060 8556, Japan
Int J Mol Med 18:161-70. 2006..In our earlier study, we showed that ribosomal protein L13 mRNA was up-regulated in response to DNA damage in hamster cells...
- Molecular and expression analysis of a family of the Amblyomma americanum tick LospinsAlbert Mulenga
Department of Entomology, College of Agriculture and Life Sciences, Texas A and M University, TAMU 2475, College Station, TX 77843, USA
J Exp Biol 210:3188-98. 2007..of deduced amino acid sequences revealed two patterns of basic residues: (i) (86)DKSRVLKAYKRL(97) in L5 and L13-16 and (ii) (158)VRDKTRGKI(166) in all Lospins, which are similar to consensus glycosaminoglycan (GAG) binding ..
- Properties of the C-terminal tail of human mitochondrial inner membrane protein Oxa1L and its interactions with mammalian mitochondrial ribosomesMd Emdadul Haque
Department of Chemistry, University of North Carolina, Chapel Hill, North Carolina 27599 3290, USA
J Biol Chem 285:28353-62. 2010..Oxa1L-CTT cross-links to mammalian mitochondrial homologs of the bacterial ribosomal proteins L13, L20, and L28 and to mammalian mitochondrial specific ribosomal proteins MRPL48, MRPL49, and MRPL51...
- Construction of expression vectors for protein production in Gluconobacter oxydansVerena Kallnik
Universitat Bonn, Institut für Mikrobiologie and Biotechnologie, 168 Meckenheimer Allee, 53515 Bonn, Germany
J Biotechnol 150:460-5. 2010..To this end, promoter regions for the genes encoding G. oxydans ribosomal proteins L35 and L13 were introduced into the broad-host-range plasmid pBBR1MCS-2 to construct two new expression vectors for gene ..
- Molecular immune recognition of botulinum neurotoxin B. The light chain regions that bind human blocking antibodies from toxin-treated cervical dystonia patients. Antigenic structure of the entire BoNT/B moleculeM Zouhair Atassi
Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, United States
Immunobiology 217:17-27. 2012..The peptides most frequently recognized were: L13, by 30 of 30 antisera (100%); L22, by 23 of 30 (76.67%); L19, by 15 of 30 (50.00%); L26, by 11 of 30 (36...
- Structural effect of the L16Q, K50E, and R53P mutations on homeodomain of pituitary homeobox protein 2M Rajasekaran
Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan, ROC
Int J Biol Macromol 51:305-13. 2012..The hydrophobic core residues F8, L13, L40 and V45 change their positions in all mutants to break the hydrophobic core...
- The SbMT-2 gene from a halophyte confers abiotic stress tolerance and modulates ROS scavenging in transgenic tobaccoAmit Kumar Chaturvedi
Discipline of Marine Biotechnology and Ecology, CSIR Central Salt and Marine Chemicals Research Institute, Bhavnagar, Gujarat, India
PLoS ONE 9:e111379. 2014..Transgenic tobacco lines (L2, L4, L6 and L13) showed significantly enhanced salt (NaCl), osmotic (PEG) and metals (Zn++, Cu++ and Cd++) tolerance compared to WT ..
- Stably expressed housekeeping genes across developmental stages in the two-spotted spider mite, Tetranychus urticaeChunxiao Yang
Hunan Academy of Agricultural Sciences, Institute of Plant Protection, Changsha, Hunan, China Department of Entomology, University of Kentucky, Lexington, Kentucky, United States of America
PLoS ONE 10:e0120833. 2015..Actin) , elongation factor 1 α (EF1A) , glyceralde hyde-3-phosphate dehydrogenase (GAPDH) , ribosomal protein L13 (RPL13) , ribosomal protein 49 (RP49) , α-tubulin (Tubulin) , vacuolar-type H+-ATPase (v-ATPase) , succinate ..
- A redox regulatory system critical for mycobacterial survival in macrophages and biofilm developmentKerstin A Wolff
Department of Molecular Biology and Microbiology, School of Medicine, Case Western Reserve University, Cleveland, Ohio, United States of America
PLoS Pathog 11:e1004839. 2015..that PknG is an integral component of a novel redox homeostatic system, RHOCS, which includes the ribosomal protein L13 and RenU, a Nudix hydrolase encoded by a gene adjacent to pknG. Studies in M...
- Evaluation of housekeeping genes as references for quantitative real-time PCR analysis of gene expression in the murrel Channa striatus under high-temperature stressGopal Krishna Purohit
KIIT School of Biotechnology, KIIT University, Bhubaneswar, Odisha, 751024, India
Fish Physiol Biochem 42:125-35. 2016..ribosomal RNA, glyceraldehyde-3-phosphate dehydrogenase (gapdh), beta actin (βactin), ribosomal binding protein L13, tubulin and TATA-box-binding protein (tbp) were carried out to test their efficacy as reference genes in three ..
- Selection of best-performing reference gene products for investigating transcriptional regulation across silvering in the European eel (Anguilla anguilla)Silvia Franzellitti
University of Bologna, Department of Biological, Geological, and Environmental Sciences, Via Selmi 3, 40100 Bologna Italy
Sci Rep 5:16966. 2015..Stability analysis and further statistical validation identified transcripts encoding the ribosomal proteins L13 and ARP as the appropriate reference genes in studies on A. anguilla through silvering...
- Structural basis for human PRDM9 action at recombination hot spotsAnamika Patel
Department of Biochemistry, Emory University School of Medicine, Atlanta, Georgia 30322, USA
Genes Dev 30:257-65. 2016..Allele L13 displayed higher affinity for several A-specific sequences, allele L9/L24 displayed lower affinity, and allele L20 ..
- In planta Transformed Cumin (Cuminum cyminum L.) Plants, Overexpressing the SbNHX1 Gene Showed Enhanced Salt EnduranceSonika Pandey
Marine Biotechnology and Ecology Division, CSIR Central Salt and Marine Chemicals Research Institute, G B Marg, Bhavnagar, Gujarat, 364002, India
PLoS ONE 11:e0159349. 2016..Transgenic lines L3 and L13 showed high expression of the SbNHX1 gene compared to L6 whereas moderate expression was detected in L5 and L10 ..
- Changes in biting forces with implant-supported overdenture in the lower jaw: A comparison between conventional and mini implants in a pilot studyI Hasan
Endowed Chair of Oral Technology, Rheinische Friedrich Wilhelms University, Welschnonnenstr 17, 53111 Bonn, Germany Department of Prosthetic Dentistry, Preclinical Education and Materials Science, Dental School, Rheinische Friedrich Wilhelms University, Welschnonnenstr 17, 53111 Bonn, Germany Electronic address
Ann Anat 208:116-122. 2016..3-3.7mm, L11-13mm) and 16 patients received four to five mini implants (study group, Ø1.8-2.4mm, L13-15mm) inserted in the mandibular interforaminal region...
- Comparative proteomic analysis of two clam species: Chamelea gallina and Tapes philippinarumSilvia Vincenzetti
School of Biosciences and Veterinary Medicine, University of Camerino, Camerino MC, Italy Electronic address
Food Chem 219:223-229. 2017..As a result, four differentially expressed spots were found and identified, namely enolase, cyclophilin-A, ribosomal protein L13 and actin-1.
- Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potatoChristin Zachow
Austrian Centre of Industrial Biotechnology ACIB GmbH, Petersgasse 14, 8010 Graz, Austria Institute of Environmental Biotechnology, Graz University of Technology, Petersgasse 12, 8010 Graz, Austria
Stand Genomic Sci 12:6. 2017i>Pseudomonas brassicacearum strain L13-6-12 is a rhizosphere colonizer of potato, lettuce and sugar beet...
- Localization of a series of RNA-protein cross-link sites in the 23S and 5S ribosomal RNA from Escherichia coli, induced by treatment of 50S subunits with three different bifunctional reagentsM Osswald
Max Planck Institut fur Molekulare Genetik, Abteilung Wittmann, Berlin Dahlem, FRG
Nucleic Acids Res 18:6755-60. 1990..2163-72*, l2, 1819-20*; l3, 2832-34; l4, 320-25*; 613-17*; l5, 2307; l6, 2473-81*; l9, 1484-91; l11, 1060-62; l13, 547-50; l14, 1993-2002; l17, 1260-95; l18, 2307-20; l19, 1741-58; l21, 544-48*; 1198-1248; l23, 63-65, 137-41*; ..
- Molecular characterization of a light-responsive gene, breast basic conserved protein 1 (OsiBBC1), encoding nuclear-localized protein homologous to ribosomal protein L13 from Oryza sativa indicaMukesh Jain
Centre for Plant Molecular Biology and Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, New Delhi 110021, India
Biochim Biophys Acta 1676:182-92. 2004..the gene OsiBBC1, encoding homologue of the breast basic conserved protein 1 (BBC1), similar to ribosomal protein L13, has been identified and characterized...
- P6 protein of Cauliflower mosaic virus, a translation reinitiator, interacts with ribosomal protein L13 from Arabidopsis thalianaMarina Bureau
Institut de Biologie Moleculaire des Plantes, UPR CNRS 2357, Universite Louis Pasteur, 12 rue du Général Zimmer, 67084 Strasbourg Cedex, France
J Gen Virol 85:3765-75. 2004..This study characterizes a novel cellular partner of P6, the ribosomal protein L13 from Arabidopsis thaliana...
- Defense genes missing from the flight divisionKatharine E Magor
Department of Biological Sciences, University of Alberta, Edmonton, Canada
Dev Comp Immunol 41:377-88. 2013..Chickens also lack RIG-I, the intracellular detector for single-stranded viral RNA. Riplet, an activator for RIG-I, is also missing in chickens...
- RNF135, RING finger protein, promotes the proliferation of human glioblastoma cells in vivo and in vitro via the ERK pathwayYongjian Liu
Department of Interventional Therapy, First Affiliated Hospital, Dalian Medical University, Dalian, People s Republic of China
Sci Rep 6:20642. 2016Ring finger protein 135 (RNF135), located on chromosome 17q11.2, is a RING finger domain-containing E3 ubiquitin ligase that was identified as a bio-marker and therapy target of glioblastoma...
- Taxonomic and functional diversity of the culturable microbiomes of epigeic earthworms and their prospects in agricultureArjun Singh
Division of Microbiology, ICAR Indian Agricultural Research Institute, New Delhi, India
J Basic Microbiol 56:1009-20. 2016..excavatus - Arthrobacter pascens IARI-L13 and Bacillus subtilis IARIC were able to utilize 54 and 51.4% of the carbohydrates tested...
- N6-benzyladenosine derivatives as novel N-donor ligands of platinum(II) dichlorido complexesPavel Starha
Regional Centre of Advanced Technologies and Materials, Department of Inorganic Chemistry, Faculty of Science, Palacky University, 17 listopadu 12, CZ 77146 Olomouc, Czech Republic
Molecules 18:6990-7003. 2013....
- Behavioral and cytogenetic analysis of the cacophony courtship song mutant and interacting genetic variants in Drosophila melanogasterS J Kulkarni
Genetics 115:461-75. 1987..tests involving cac and other closely linked genetic variants--the night-blind-A (nbA) visual mutation, l(1)L13 lethal mutations, and a series of X chromosomal breakpoints--suggested complex interactions among these factors: ..
- Strain-specific colonization pattern of Rhizoctonia antagonists in the root system of sugar beetChristin Zachow
Institute of Environmental Biotechnology, Graz University of Technology, Graz, Austria
FEMS Microbiol Ecol 74:124-35. 2010..The study included bacteria (Pseudomonas fluorescens L13-6-12, Pseudomonas trivialis RE(*) 1-1-14, Serratia plymuthica 3Re4-18) as well as fungi (Trichoderma gamsii AT1-2-4,..
- Regulation of somatic growth and gene expression of the GH-IGF system and PRP-PACAP by dietary lipid level in early juveniles of a teleost fish, the pejerrey (Odontesthes bonariensis)Pedro Gómez-Requeni
Instituto de Investigaciones Biotecnológicas Instituto Tecnologico Chascomús IIB INTECH, Chascomús, Buenos Aires, Argentina
J Comp Physiol B 182:517-30. 2012..growth factors (IGFs) were analyzed in pejerrey fry fed with graded levels of dietary lipids: 10% (L10), 13% (L13) and 21% (L21)...
- Inhibition of gecko GSK-3β promotes elongation of neurites and oligodendrocyte processes but decreases the proliferation of blastemal cellsYingjie Wang
Key Laboratory of Neuroregeneration, Nantong University, Nantong 226007, PR China
J Cell Biochem 113:1842-51. 2012..GSK-3β (pGSK-3β) levels decreased gradually during the normally regenerating spinal cord ranging from L13 to the 6th caudal vertebra...
- Lactobacillus yonginensis sp. nov., a lactic acid bacterium with ginsenoside converting activity isolated from KimchiEun Ji Yi
Graduate School of Biotechnology, Kyung Hee University, Yongin, Gyeonggi 446 701, Republic of Korea
Int J Syst Evol Microbiol 63:3274-9. 2013..8% sequence similarity), Lactobacillus parabrevis LMG 11984(T) (97.7%), Lactobacillus senmaizukei L13(T) (97.5%), Lactobacillus hammesii TMW1.1236(T) (97.3%) and Lactobacillus brevis ATCC 14687(T) (97.2%)...
- Validation of reference genes for gene expression analysis in Valsa mali var. mali using real-time quantitative PCRZhiyuan Yin
State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A and F University, Yangling 712100, China
World J Microbiol Biotechnol 29:1563-71. 2013..Therefore, eight commonly used housekeeping genes (ACT, CYP, EF1-α, G6PDH, GAPDH, L13, TUB, and UBQ) were cloned and evaluated for their expression stability by geNorm and NormFinder...
- Physiological and metabolic consequences of autophagy deficiency for the management of nitrogen and protein resources in Arabidopsis leaves depending on nitrate availabilityAnne Guiboileau
UMR1318, INRA, Institut Jean Pierre Bourgin, RD10, 78026, Versailles Cedex, France
New Phytol 199:683-94. 2013..Specific over-accumulation of the ribosomal proteins S6 and L13 subunits, and of catalase and glutamate dehydrogenase proteins was observed...
- Therapeutic effects of bacteriophages against Salmonella gallinarum infection in chickensSung Sik Hong
Department of Bioscience and Biotechnology, Hankuk University of Foreign Studies, Yong In 449 791, Republic of Korea
J Microbiol Biotechnol 23:1478-83. 2013In this study the isolation and characterization of three bacteriophages (ST4, L13, and SG3) infecting Salmonella gallinarum were carried out. They were further tested for their in vivo efficacy in phage therapy...
- Escherichia coli kasugamycin dependence arising from mutation at the rpsI locusE R Dabbs
J Bacteriol 153:709-15. 1983..It was very close to the gene for ribosomal protein L13, rplM. Another mutation at the rpsI locus gave rise to a phenotype of kasugamycin dependence and resistance...
- Reduction in infectivity of endogenous transmissible spongiform encephalopathies present in blood by adsorption to selective affinity resinsLuisa Gregori
Veterans Affairs Maryland Health Care System, VA Medical Center, University of Maryland at Baltimore, MD 21201, USA
Lancet 368:2226-30. 2006..In our study, affinity resin L13, which reduces brain-derived infectivity spiked into human red blood cell concentrate by around 4 log(10)ID(50), ..
- The rice nuclear gene WLP1 encoding a chloroplast ribosome L13 protein is needed for chloroplast development in rice grown under low temperature conditionsJian Song
State Key Laboratory of Rice Biology, Key Laboratory of Rice Biology and Breeding of Ministry of Agriculture, China National Rice Research Institute, Hangzhou, 310006, China
Plant Mol Biol 84:301-14. 2014..cloning of WLP1, followed by complementation and knock-down experiments, showed that it encodes a 50S ribosome L13 protein. The WLP1 protein localized to the chloroplast...
- Isolation and characterization of specialized transducing lambda phages carrying ribosomal protein genes of Escherichia coliM Kitakawa
Mol Gen Genet 180:343-9. 1980..To investigate whether these phages also carry the genes for r-proteins S9, L13, L20, L31 and L34 whose gene locations are not known, cells irradiated with UV light were infected with these ..
- Analyses in transfected cells and in vitro of a putative peroxisomal targeting signal of rat liver serine:pyruvate aminotransferaseTakuji Mizuno
Department of Biochemistry, Hamamatsu University School of Medicine, 1 20 1 Handayama, Hamamatsu, Shizuoka 431 3192, Japan
Histochem Cell Biol 118:321-8. 2002..In the cases of mutation of R18G, D19A, or K2Q and the conversion to proline of L9, L13, V17, or A20, no products were detected in transfected cells...
- [Alternative pathways of the initial transformation of 2,4,6-trinitrotoluene by yeasts]S A Zaripov
Kazan State University, ul Kremlevskaya 18, Kazan, 420008 Russia
Mikrobiologiia 71:648-53. 2002..Candida sp. AN-L13 almost completely transformed TNT into H-TNT through the reduction of the aromatic ring. Candida sp...
- Primary structure of arabinoxylans of ispaghula husk and wheat branSandra Edwards
South Bank University, 103 Borough Road, London SE1 0AA, UK
Proc Nutr Soc 62:217-22. 2003..xylopyranose (Xylp) backbones to which a-L-arabinofuranose (AraJ3 units are attached as side residues via a-(l13) and a-(1-02) linkages...
- Multiplexed specific label-free detection of NCI-H358 lung cancer cell line lysates with silicon based photonic crystal microcavity biosensorsSWAPNAJIT CHAKRAVARTY
Department of Electrical and Computer Engineering, University of Texas at Austin, 10100 Burnet Road, Bldg 160, Austin, TX 78758, USA
Biosens Bioelectron 43:50-5. 2013..b>L13 photonic crystal microcavities, coupled to W1 photonic crystal waveguides, are employed in which resonances show ..
- Rig-I regulates NF-κB activity through binding to Nf-κb1 3'-UTR mRNAHong Xin Zhang
State Key Laboratory of Medical Genomics, Research Center for Experimental Medicine, Shanghai Institute of Hematology, Rui Jin Hospital Shanghai Jiao Tong University School of Medicine, SJTUSM, Shanghai 200025, China
Proc Natl Acad Sci U S A 110:6459-64. 2013..plays a critical role in normal translation of Nf-κb1 by recruiting the ribosomal proteins [ribosomal protein L13 (Rpl13) and Rpl8] and rRNAs (18S and 28S)...
- Type I IFN triggers RIG-I/TLR3/NLRP3-dependent inflammasome activation in influenza A virus infected cellsJulien Pothlichet
Department of Human Genetics, McGill University, Montreal, Quebec, Canada
PLoS Pathog 9:e1003256. 2013..RIG-I had the strongest effect through a MAVS/TRIM25/Riplet-dependent type I IFN signaling pathway upstream of TLR3 and NLRP3...
- Structural and biochemical characterization of HP0315 from Helicobacter pylori as a VapD protein with an endoribonuclease activityAe Ran Kwon
Department of Herbal Skin Care, College of Herbal Bio Industry, Daegu Haany University, Gyeongsan 712 715, Korea
Nucleic Acids Res 40:4216-28. 2012..Mutagenesis studies of HP0315 revealed that D7, L13, S43 and D76 residues are important for RNase activity, in contrast, to the Cas2 family...
- The relationship between bone mineral density and arterial stiffness in womenMurat Baykara
Department of Radiology, Elazig Training and Research Hospital, Elazig, Turkey
Diagn Interv Radiol 18:441-5. 2012..The aim of this study was to investigate the correlation between bone mineral density (BMD) and arterial stiffness as a preclinical atherosclerosis criterion...
- Ribosomal proteins L7 and L8 function in concert with six A₃ assembly factors to propagate assembly of domains I and II of 25S rRNA in yeast 60S ribosomal subunitsJelena Jakovljevic
Department of Biological Sciences, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, USA
RNA 18:1805-22. 2012..In the absence of L7, proteins bound to domain II, L6, L14, L20, and L33 are greatly diminished, while proteins L13, L15, and L36 that bind to domain I are affected in the absence of L8...
- [Innate immune response to RNA virus infection]Hiroyuki Oshiumi
Graduate School of Medicine, Hokkaido University
Uirusu 61:153-61. 2011..RIG-I harbors Lys63-linked polyubiquitination by Riplet and TRIM25 ubiquitin ligases. The polyubiquitination is essential for RIG-I-mediated signaling...
- Ethylene polymerization by 2-iminopyridylnickel halide complexes: synthesis, characterization and catalytic influence of the benzhydryl groupWen Hua Sun
Key Laboratory of Engineering Plastics and Beijing National Laboratory for Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing 100190, China
Dalton Trans 41:11999-2010. 2012A series of 2-(2-benzhydrylbenzenamino)pyridine ligands (L1–L13) was synthesized and used as bidentate N^N ligands with nickel halides to afford the corresponding nickel dihalide complexes L(2)Ni(2)Cl(4) C1–C13 and L(2)NiBr(2) D1–..
- Differential gene expression profile of the calanoid copepod, Pseudodiaptomus annandalei, in response to nickel exposureJie Lan Jiang
College of Ocean and Earth Sciences, State Key Laboratory of Marine Environmental Science, Xiamen University, Xiamen 361005, PR China
Comp Biochem Physiol C Toxicol Pharmacol 157:203-11. 2013..e. α-tubulin, ribosomal protein L13, ferritin, separase and Myohemerythrin-1, exhibited clear up-regulation after nickel exposure...
- Species-specific inhibition of RIG-I ubiquitination and IFN induction by the influenza A virus NS1 proteinRicardo Rajsbaum
Department of Microbiology, Mount Sinai School of Medicine, New York, New York, United States of America
PLoS Pathog 8:e1003059. 2012..Therefore, we tested if the ubiquitin E3 ligase Riplet, which has also been shown to ubiquitinate RIG-I, interacts with NS1...
- [Innate immune responses against viral infection and its suppression by viral proteins]Hiroyuki Oshiumi
Graduate School of Medicine, Hokkaido University, Sapporo, Japan
Yakugaku Zasshi 133:323-8. 2013..DDX3 and DDX60 RNA helicases associate with RIG-I and promote its binding to viral RNA. Riplet and TRIM25 ubiquitin ligase deliver Lys63-linked polyubiquitin moiety to RIG-I and result in signal activation...
- Biochemical characterization of matrilysin. Activation conforms to the stepwise mechanisms proposed for other matrix metalloproteinasesT Crabbe
Celltech Limited, Slough U K
Biochemistry 31:8500-7. 1992..From an analysis of the stability of the various intermediates, we propose that the sequence L13-K33 is particularly important in protecting the E77-Y78 site from autocatalytic cleavage, thereby maintaining the ..
- Epitope mapping of recombinant HeLa SmB and B' peptides obtained by the polymerase chain reactionK B Elkon
Hospital for Special Surgery, Cornell Medical Center, New York, NY 10021
J Immunol 145:636-43. 1990..We amplified cDNA obtained from HeLa cells by using the polymerase chain reaction and identified two clones, U2 and L13, that encode SmB and SmB', respectively...
- Cloning, sequencing, expression, and functional studies of a 15,000-molecular-weight Haemophilus somnus antigen similar to Escherichia coli ribosomal protein S9M Theisen
Veterinary Infectious Disease Organization, University of Saskatchewan, Saskatoon, Canada
J Bacteriol 174:17-23. 1992..coli ribosomal protein L13. In E. coli, the corresponding genes constitute a bicistronic operon, with the same gene order as that found in H...
- Halobacterial S9 operon. Three ribosomal protein genes are cotranscribed with genes encoding a tRNA(Leu), the enolase, and a putative membrane protein in the archaebacterium Haloarcula (Halobacterium) marismortuiW J Krömer
Max Planck Institut fur Molekulare Genetik, Abteilung Wittman, Germany
J Biol Chem 266:24573-9. 1991In the eubacterium Escherichia coli the genes for the ribosomal proteins L13 and S9 form an operon consisting of two genes...
- Regulation of poly(A) site selection in adenovirusE Falck-Pedersen
Hearst Research Foundation, Department of Microbiology, Cornell University Medical College, New York, New York 10021
J Virol 63:532-41. 1989..In an early infection, a virus which contains multiple elements presented in tandem (L13) uses the first poly(A) site, L1, preferentially (ratio of L1 to L3, 8:1) in both E1A and MLTU loci...
- Protein-protein cross-linking of the 50 S ribosomal subunit of Escherichia coli using 2-iminothiolane. Identification of cross-links by immunoblotting techniquesJ Walleczek
Max Planck Institut fur Molekulare Genetik, Abteilung Wittmann, Berlin, Dahlem, Germany
J Biol Chem 264:4231-7. 1989..A total of 14 cross-links have been identified: L1-L33, L2-L9, L2-L9-L28, L3-L19, L9-L28, L13-L21, L14-L19, L16-L27, L17-L30, L17-L32, L19-L25, L20-L21, L22-L32, and L23-L34...
- Immunoblotting analysis of protein-protein crosslinks within the 50S ribosomal subunit of Escherichia coli. A study using dimethylsuberimidate as crosslinking reagentB Redl
Institut fur Mikrobiologie, Medizinische Fakultät der Universität, Innsbruck, Austria
Eur J Biochem 181:351-6. 1989..Thus 13 crosslinks have been identified, namely L1-L33, L5-L7/12, L6-L19, L7/12-L10, L7/12-L11, L9-L28, L10-L11, L13-L20, L16-L27, L17-L32, L18-L22, L19-L25 and L27-L33...
- Structural arrangement of tRNA binding sites on Escherichia coli ribosomes, as revealed from data on affinity labelling with photoactivatable tRNA derivativesD M Graifer
Institute of Bioorganic Chemistry, Siberian Division of the Academy of Sciences of the U S S R, Novosibirsk
Biochim Biophys Acta 1008:146-56. 1989..S11, S13 and S19 in all states, whereas the labelling of the proteins S5, S7, S9, S12, S14, S20, S21 as well as L2, L13, L14, L17, L24, L27, L31, L32, L33 depended on the type of complex...
- Comparative cross-linking study on the 50S ribosomal subunit from Escherichia coliJ Walleczek
Max Planck Institut fur Molekulare Genetik, Abteilung Wittmann, Berlin, FRG
Biochemistry 28:4099-105. 1989..smallest cross-linking reagent diepoxybutane (4 A), four cross-links have been identified, namely, L3-L19, L10-L11, L13-L21, and L14-L19. With the sulfhydryl-specific cross-linking reagent o-phenylenedimaleimide (5...
- Cotranscription of the S10- and spc-like operons in spinach chloroplasts and identification of three of their gene productsD X Zhou
Centre National de la Recherche Scientifique URA 57, Universite Joseph Fourier, Grenoble, France
Mol Gen Genet 216:439-45. 1989..of the rpl22, rpl16 and rpl14 genes are identified respectively as the spinach chloroplast ribosomal proteins CS-L13, CS-L24 and CS-L29...
- Preoperative isolation of a reversible protein-protein crosslink generated in 50 S subunits of Escherichia coli ribosomes and identification of its componentsH J Schönfeld
Max Planck Institut fur Molekulare Genetik, Abteilung Wittmann, Berlin, Federal Republic of Germany
Anal Biochem 164:23-30. 1987The reversible crosslinked protein complex L13-L21 was isolated from Escherichia coli ribosomes in milligram amounts. Tight couples (70 S) were crosslinked with the bifunctional reagent diepoxybutane...
- Ribosomal components neighboring the 2475 loop in Escherichia coli 50S subunitsP Muralikrishna
Department of Chemistry, University of Pennsylvania, Philadelphia 19104 6323
Biochemistry 34:115-21. 1995..On photolysis in the presence of 50S subunits, it site-specifically incorporates into proteins L1, L13, L16, L32, and L33 and into 23S rRNA nucleotides G2470, A2471, and G2472...
- The Drosophila melanogaster homologue of the human BBC1 gene is highly expressed during embryogenesisN R Helps
Department of Biochemistry, University of Leicester, UK
Gene 162:245-8. 1995..The sequences of all the predicted BBC1 proteins are highly similar to that of the rat ribosomal subunit protein L13 [Olvera and Wool, Biochem. Biophys. Res. Commun...
- A leucine zipper-like motif and a basic region-leucine zipper-like element in rat ribosomal protein L13a. Identification of the tum- transplantation antigen P198Y L Chan
Department of Biochemistry and Molecular Biology, University of Chicago, Illinois 60637
J Biol Chem 269:5589-94. 1994..proteins that have been provisionally designated rp22 and rp23 and to the eubacterial and archaebacterial family of L13 ribosomal proteins...
- The primary structure of rat ribosomal protein L13J Olvera
Department of Biochemistry and Molecular Biology, University of Chicago, Illinois 60637
Biochem Biophys Res Commun 201:102-7. 1994The amino acid sequence of the rat 60S ribosomal subunit protein L13 was deduced from the sequence of nucleotides in two recombinant cDNAs...
- A Drosophila calcium channel alpha1 subunit gene maps to a genetic locus associated with behavioral and visual defectsL A Smith
Department of Biology, Brandeis University, Waltham, Massachusetts 02254, USA
J Neurosci 16:7868-79. 1996..Dmca1A maps to a chromosomal region implicated in, and is the likely candidate for, the gene involved in the generation of behavioral, physiological, and lethal phenotypes of the cacophony, nightblind-A, and lethal(1)L13 mutants.
- Recombination creates novel L1 (LINE-1) elements in Rattus norvegicusB E Hayward
Laboratory of Molecular and Cellular Biology, National Institute of Diabetes, Maryland 20892 0830, USA
Genetics 146:641-54. 1997..While its 3' UTR shares the same lineage as its nearest chronologically antecedent subfamilies, L13 and L14, its ORF I sequence does not...
- Cloning, sequencing and transcriptional analysis of a Streptomyces coelicolor operon containing the rplM and rpsI genes encoding ribosomal proteins ScoL13 and ScoS9C Sanchez
Departamento de Biologia Funcional, Instituto Universitario de Biotecnologia de Asturias I U B A C S I C, Universidad de Oviedo, Spain
Mol Gen Genet 257:91-6. 1997..The deduced products of the two complete genes. rplM and rpsI, showed clear similarities to L13 and S9 ribosomal proteins from various organisms...
- Courtship and visual defects of cacophony mutants reveal functional complexity of a calcium-channel alpha1 subunit in DrosophilaL A Smith
Department of Biology, Brandeis University, Waltham, Massachusetts 02254, USA
Genetics 149:1407-26. 1998..Dmca1A calcium-channel alpha1 subunit is encoded by the cacophony (cac) gene and that nightblind-A and lethal(1)L13 mutations are allelic to cac with respect to an expanded array of behavioral and physiological phenotypes ..
- tRNA-assisted overproduction of eukaryotic ribosomal proteinsG Dieci
Institute of Biochemical Sciences, University of Parma, Parma, I 43100, Italy
Protein Expr Purif 18:346-54. 2000..system, five cytoplasmic ribosomal proteins from three different eukaryotic lineages (Saccharomyces cerevisiae S8, L13, and L14; Arabidopsis thaliana L13; and Homo sapiens L7) could be overexpressed to up to 50% of total bacterial ..
- Gemcitabine plus best supportive care (BSC) vs BSC in inoperable non-small cell lung cancer--a randomized trial with quality of life as the primary outcome. UK NSCLC Gemcitabine Group. Non-Small Cell Lung CancerH Anderson
Wythenshawe Hospital, Manchester, UK
Br J Cancer 83:447-53. 2000..0014, Pearson's chi-squared test). The QLQ-C30 and L13 subscales showed greater improvement in the gemcitabine plus BSC arm (in 11 domains) than in the BSC arm (one ..
- Activation of the NF-kappaB pathway by caspase 8 and its homologsP M Chaudhary
Hamon Center for Therapeutic Oncology Research, UT Southwestern Medical Center, Dallas, Texas, TX 75390 8593, USA
Oncogene 19:4451-60. 2000..Thus, DEDs-containing caspases and caspase homolog(s) may have functions beyond their known role in the mediation of cell death. Oncogene (2000) 19, 4451 - 4460...
- Specific alterations of U1-C protein or U1 small nuclear RNA can eliminate the requirement of Prp28p, an essential DEAD box splicing factorJ Y Chen
Department of Molecular Genetics, Ohio State University, Columbus, OH 43210, USA
Mol Cell 7:227-32. 2001..Further analysis suggests that the conserved L13 residue in the U1-C protein makes specific contact to stabilize the U1 snRNA/5' splice site duplex in the ..
- Ribosomal protein S4 is a transcription factor with properties remarkably similar to NusA, a protein involved in both non-ribosomal and ribosomal RNA antiterminationM Torres
Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA 02111, USA
EMBO J 20:3811-20. 2001..new proteins potentially involved in rRNA transcription antitermination: ribosomal (r-) proteins S4, L3, L4 and L13. We show here that these r-proteins and Nus factors lead to an 11-fold increase in terminator read-through in in ..
- Role of inorganic polyphosphate in promoting ribosomal protein degradation by the Lon protease in E. coliA Kuroda
Department of Molecular Biotechnology, Graduate School of Advanced Sciences of Matter, Hiroshima University, 1 4 1 Kagamiyama, Hiroshima 739 8527, Japan
Science 293:705-8. 2001..protease Lon formed a complex with polyP and degraded most of the ribosomal proteins, including S2, L9, and L13. Purified S2 also bound to polyP and formed a complex with Lon in the presence of polyP...
- Systematic search for zinc-binding proteins in Escherichia coliAkira Katayama
National Institute of Genetics, Department of Molecular Genetics, Mishima, Shizuoka, Japan
Eur J Biochem 269:2403-13. 2002..GlyA), transketolase isozymes (TktA/TktB), translation elongation factor Ts (Tsf), ribosomal proteins L2 (RplB), L13 (RplM) and one of S15 (RpsO), S16 (RpsP) or S17 (RpsQ)...
- The ribosome modulation factor (RMF) binding site on the 100S ribosome of Escherichia coliHideji Yoshida
Department of Physics, Osaka Medical College, Takatsuki, Osaka, 569 8686, Japan
J Biochem 132:983-9. 2002..face-to-face contacts between their constituent 30S subunits, and (ii) RMF binds near the ribosomal proteins S13, L13, and L2...
- Single-chain Fv multimers of the anti-neuraminidase antibody NC10: the residue at position 15 in the V(L) domain of the scFv-0 (V(L)-V(H)) molecule is primarily responsible for formation of a tetramer-trimer equilibriumOlan Dolezal
CSIRO Health Sciences and Nutrition, 343 Royal Parade, Parkville 3052, Victoria, Australia
Protein Eng 16:47-56. 2003..These model structures indicated that steric restrictions between loops spanning amino acid residues L55-L59 and L13-L17 from the two adjacent V(L) domains within the V(L)-V(H) trimer were responsible for four scFv-0 molecules ..
- The DEAD-box RNA helicase SrmB is involved in the assembly of 50S ribosomal subunits in Escherichia coliJulie Charollais
Laboratoire de Genetique Moleculaire, CNRS UMR8541, Ecole Normale Superieure, 46 rue d Ulm, 75230 Paris Cedex 05, France
Mol Microbiol 48:1253-65. 2003..In particular, it lacks L13, one of the five ribosomal proteins that are essential for the early assembly step in vitro...
- Novel cellulase profile of Trichoderma reesei strains constructed by cbh1 gene replacement with eg3 gene expression cassetteTian Hong Wang
The State Key Laboratory of Microbial Technology, Shandong University, Jinan 250100, China
Acta Biochim Biophys Sin (Shanghai) 36:667-72. 2004..gene was confirmed by PCR, Southern dot blot and Western hybridization analysis in two transformants denoted as L13 and L29...
- All trans-retinoic acid (ATRA) elevated eukaryotic translation initiation factor 4A1 (eIF4A1) mRNA in ATRA-responsive vitiliginous epidermisAi Young Lee
Department of Dermatology, Eulji University School of Medicine, Seoul, South Korea
Pigment Cell Res 17:659-67. 2004..which were matched with sequences encoding eukaryotic translation initiation factor 4A1 (eIF4A1), ribosomal protein L13, mediator of RNA polymerase to transcription (MRT) and ribosomal phosphoprotein PO...
- Insights into structural proteins of 936-type virulent lactococcal bacteriophagesA M Crutz-Le Coq
Laboratoire de Genetique Microbienne, INRA, Jouy en Josas, France
Arch Virol 151:1039-53. 2006..fractions of bIL170 exhibited a major 38 kDa protein, identified by N-terminal sequence as the product of l13. This result questions some of the functional predictions deduced from synteny relationships assumed for the lambda-..
- Synthesis of Macrolides, Steroids, Cyclopentanoids, etc.BARRY TROST; Fiscal Year: 2009..These new synthetic methods apply to many structural types beyond those illustrated and constitutes a significant to gain access to complex molecular targets more easily. ..